Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813694.1_cds_XP_016497656.1_11761
CDS Infomation

[gene=LOC107816447] [db_xref=GeneID:107816447] [protein=organic cation/carnitine transporter 4-like isoform X2] [protein_id=XP_016497656.1] [location=join(25600..25862,26115..26278,29901..31090)] [gbkey=CDS]
Sequence

ATGTCAAAATCATCAGCTTTATCAACAAATCAACAAGATGGTGGAGACCTCCGGTCACCG
CTCATCCCGCCGGCGGCGGATGGATATTCAAAACCGAAGAAAGTAACGATGGATCAAATG
TTGGAAAAATACTGCGGCGAGTTTGGGTGGTGGCAATTGAGACATTTCGTGCTAACGAGC
TTGGCTTGGGCGCTGGAAGGGATTCACACCATGGTCATGATTTTTTCGGATCGTGAACCC
GGGTGGCGGTGTTCGACGAGTCGNGGGTGCGGTTCAACGGCTAAAAGTGTGTGCGACCTT
GAGCCAGGGTCTTGGGAATGGTTCGGTGGAATTGGAAGTTCTACGGTATCGGAGTTTGGA
TTGATATGTGGACAGAAATACAGAGTTGGTCTTGTCCAAGCCTTATTTTTCGCTGGCTGC
ATGATCGGTGCTGGAGTATTTGGACATCTCTCAGACTCCAAATTAGGAAGGAAAGGCTCC
CTCACAATTGTTTGCATCTTAAACGCCATCTTTGGTTGTATAACAGCATTCTCTTCGGAC
TACTGGACCTATACCTTATTCCGTTTTCTTTCCGGTTTCAGCACCGGCGGCACTGGCCTT
TGTTCTTTTGTTCTTGCCACTGAACCCGTTGGCCAGTCCTGGCGCGGCGTAGCAGGAATG
TCCACGTTCTATTTTTTCTCTACTGGGATAGCCGCTCTCTCTGCCATTGCTTATTTCTTC
CAGTCGTGGCGCTCTCTTTACATTGCTTCTTCAGTCCCATCTGTTCTGTTCGTTATCCTC
GTACTTCCTTTCCTCCACGAGTCACCTCGCTGGTGCCTCGTTAGAGGAAAGGTAGATGAA
GCCATGAAGATCATGCATAAAATCGCCATATCAAATGGAAAACACCTTCCTGATGGAGTT
CTTCTTGCACTCGACAGTGAAGTGAATAATGATGATGCTCCTCATTCTCAATCCGAATCA
AAGCTGGAACCCGATACCAAAGAAGCGTTAAACGGATCCCTTTTAGATGTACTAAGGTTT
CCTCTAACGCGATTTCGGTTGTTCTTAGCTGTGGCTATTAACTTCTTCTGTTCCGTTGTC
TATTACGGGTTGAGTTTGAATGCTGTCAACCTTGGAACCAATCTCTACCTGAACGTTGCT
CTTAACGCAGTGGCTGAAATGCCTGCCTATCTTATAACCGCATTAGTTTTGGACAGGCTC
GGTAGAAAGCCATTAGCAATATGGACAATGTGGTTCAGTGGAGCTTTTTGCTTGGCAGGA
AGCTTGATGAAAGGTTACGGAGCGTGGAAAATTGTTCGAATGGTTTGTGGAGTTTTAGGT
ATATTTGGTATGGCTGGGAGTTACAATTTGTTGTTCGTGTATTCGATGGAGTTGTTTCCA
ACTGTGGTGAGAAATGCAGCATTAGGATGTGCAACTCAGGCGTCGCAAATGGGGGCAATT
TTGGCACCCCTTGTGGTTGTTTTAGGGGGTGGCATACCATTTGCAGTGTTTGGAGCATGT
GGAATAGCTGGAGGGTTACTGGTAATGTACTTGCCTGAAACCTTAAACAGACCATTATAT
GACACAATGGCTGGAATGGAAGAAGCTGAAGCAGAGAAACCATGTATTCTAGCTTAA

Peptide Sequence

PEP ID

XP_016497656.1
PEP Infomation

PREDICTED: organic cation/carnitine transporter 4-like isoform X2 [Nicotiana tabacum]
Sequence

MSKSSALSTNQQDGGDLRSPLIPPAADGYSKPKKVTMDQMLEKYCGEFGWWQLRHFVLTS
LAWALEGIHTMVMIFSDREPGWRCSTSRGCGSTAKSVCDLEPGSWEWFGGIGSSTVSEFG
LICGQKYRVGLVQALFFAGCMIGAGVFGHLSDSKLGRKGSLTIVCILNAIFGCITAFSSD
YWTYTLFRFLSGFSTGGTGLCSFVLATEPVGQSWRGVAGMSTFYFFSTGIAALSAIAYFF
QSWRSLYIASSVPSVLFVILVLPFLHESPRWCLVRGKVDEAMKIMHKIAISNGKHLPDGV
LLALDSEVNNDDAPHSQSESKLEPDTKEALNGSLLDVLRFPLTRFRLFLAVAINFFCSVV
YYGLSLNAVNLGTNLYLNVALNAVAEMPAYLITALVLDRLGRKPLAIWTMWFSGAFCLAG
SLMKGYGAWKIVRMVCGVLGIFGMAGSYNLLFVYSMELFPTVVRNAALGCATQASQMGAI
LAPLVVVLGGGIPFAVFGACGIAGGLLVMYLPETLNRPLYDTMAGMEEAEAEKPCILA

Transcript Sequence

Gene sequence data has not been registered.